Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRHVIAFGLKIEILKKYKRTLQAHDDLRQ-LEPLGFENTQGSVYLKDQ
2IVY Chain:A ((2-40))
AMLYLIFYDITDD---------NLRNRVAEFLKKKGLDRIQYSVFMGDL
General information:
TITO was launched using:
RESULT:
Template:
2IVY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9624 for 186 contacts (-51.7/contact) +
2D Compatibility (PS) -4081 + (NN) -275 + (LL) 992
1D Compatibility (HY) -2800 + (ID) 350
Total energy: -16138.0 ( -86.76 by residue)
QMean score : 0.584
(partial model without unconserved sides chains):
PDB file :
Tito_2IVY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IVY-query.scw
PDB file :
Tito_Scwrl_2IVY.pdb
: