Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKFLSILSILVLALLVTACGSDSSDKKSAKKEEKMETVTYIADINGAKLEATFSHVGDNLRKVDQKMVYPLTALGLES---GANLDDATKKQLEEQVASQYSAYKESKGASLETKFTDE-ALELTMSVDLYKADKDSVASLLGGTTDPKNVSLKETVKQFEAQGFKKKES |
4L03 Chain:A ((26-107)) | ---------------------------------------------------------------IKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDAAE--AIKKHNVGVKCATITPDEKRVEEFKLKQMWKSPNDTIRNILGGTV------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L03.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 21660 for 435 contacts (49.8/contact) +
2D Compatibility (PS) -8213 + (NN) -1351 + (LL) 6496
1D Compatibility (HY) -3200 + (ID) 1150
Total energy: 14242.0 ( 32.74 by residue)
QMean score : 0.246
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