Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LAEGLRTIYFVRHGKTEWNMTGQMQGWGDSPLVAEGIDGAKAVGEVLKDMQIDAVYTSTSKRTQDTAAYILGDRE---IEIQPLEELKEMGFGTWEGIRVTEIDEK--------HPEERAK--------ILHSPETYKAEVNGGETYYELAERLLEGVEKI---IADNPNGNILVVSHGMSLTLLLYLLQGGTIEDHRKEAPRILNTSISIVEYQNGEFSLKKINEIGHLDLK
3R7A Chain:A ((15-228))
------TLYVTRHGKTILNTNHRAQGWADSPLVEKGVEVATNLGTGLKDIHFMNAYSSDSGRAIETANLVLKYSEQSKLKLEQRKKLRELNFGIFEGEKLDNMWDAVGKAAGVTSPEELLKFSIQEVIDLIRAADPTKQ----AEDWELFSTRIKAEIDKISEEAAKDGGGNVLVVVHGLLITTLIEML------DSSKTKLGVENASVTKIVYQDGIYTVESVGDMSYV---
General information:
TITO was launched using:
RESULT:
Template:
3R7A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80563 for 1576 contacts (-51.1/contact) +
2D Compatibility (PS) -20137 + (NN) -4429 + (LL) 872
1D Compatibility (HY) -14000 + (ID) 3150
Total energy: -121407.0 ( -77.03 by residue)
QMean score : 0.422
(partial model without unconserved sides chains):
PDB file :
Tito_3R7A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R7A-query.scw
PDB file :
Tito_Scwrl_3R7A.pdb
: