Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDWRKTQMIFIVTLLILNVFLAVIFFNKQLSDDPDTLGNETLEERLKADNISHPDLSTKPTSGSIFTTERAAFTTKDVSDLTGQAITLKDNNKQIYSVLQTPVKAGKKGSNPEFQKFMESDV----YRGESYQFWNYDKDARTLTFNQLINNNMVLFDEAGQITFYLDQDDRVISYEQTWMSKQDDLKDKTNLMSATDALEAVYQHGELKQDSDVVSATFGYYTTVQLPSGNVYFPVWCFEVKHSGETNYVLVNAKDEQVINQSENKSTTEPGAELSSRQKAK |
| 4PKX Chain:A ((25-168)) | ----------------------------------------------------YPPLYEREAQ----DNAELGMIKPDQLASLNQALTDSYTTRDTNSILRS------RMSVSYLKGYTYEDILIVRFRPESEIYWPISQDSRNAMIDKLS-NTSVNFEVSLEFTRP-----AALKHSKSWL------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PKX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 15601 for 526 contacts (29.7/contact) +
2D Compatibility (PS) -10923 + (NN) 2774 + (LL) 10672
1D Compatibility (HY) -2000 + (ID) 1100
Total energy: 15024.0 ( 28.56 by residue)
QMean score : -0.049
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