Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKFLKKYGFYFLLLGVLSDFLTPYILGIFYPELNQMTRVMSVFGDVTSPVRGAFLVWSVVSGVFFVLALPAIYQSVVKTSRTLAILLASAIGLYGIGDCIFTGLFSIDTEQASWTFSTWVHNIGSGLGYAGFLIFPLFLVILYRKTGDKTRSNIYLVLLIVSLLSAGVYGLARIPAVNDLPVL--DKIGFCQRISFFFNYLPIVVFGIDRIRKP |
1IVW Chain:A ((590-623)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------FGLTHFPRVEDWPIMPVDTVGFKLRPEGFFDRSPVL---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IVW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2168 for 89 contacts (-24.4/contact) +
2D Compatibility (PS) -3194 + (NN) -382 + (LL) 14400
1D Compatibility (HY) 800 + (ID) 50
Total energy: 9406.0 ( 105.69 by residue)
QMean score : 0.124
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