Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEAIERRDDDMTIVSFEVEISAPIQEVFALLTTNTGLAKWF--NELEVGELGADGYLLFVMTPEEKITMPIRAFEPNQKLAFEWDQDE--VAFELNEITANKTRLTFTEQLTTITEHSPRDISGWHICLKKLQASAEGKIYDFNKTEFKTLFAKYQKELNIEK
2KTE Chain:A ((3-100))
-----QNNENALPDITKSITLEAPIQKVWETVSTSEGIAKWFMPNDFQLKE----GQEFHLQSPFGPSPCKVLAVQAPTELSFEWDTEGWVVTFQLEDL-GEKTGFTL--------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2KTE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34605 for 544 contacts (-63.6/contact) +
2D Compatibility (PS) -9896 + (NN) -1611 + (LL) 4944
1D Compatibility (HY) -7600 + (ID) 1350
Total energy: -50118.0 ( -92.13 by residue)
QMean score : 0.355
(partial model without unconserved sides chains):
PDB file :
Tito_2KTE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KTE-query.scw
PDB file :
Tito_Scwrl_2KTE.pdb
: