Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LSYEPNTKETMQKIKELTSIPSPTG---NTGKIIEKLAKDLDASKIPYRLNNKGGLIVTLPGKDETKHRML-TAHVDTLGAMVKEIKADGRLLLTLIGGYRFNAIEGEYCTIETSAGDLYSGTILMHQTSVHVYKDAGTAERNDKNMEVRLDVKALDADKVRALGIEVGDFVSFDPRVQIINDEYIKSRHLDDKASVAILLQLINHIHENNLELPHTTHFLISNNEEIGYGG-----NSNIPAETVEYLAVDMGALGDGQTSDEYTVS---ICAKDGSGPYHLGLRKHLVELAKKNNIDYKVDIYPFYASDASAAINAGNDIIHGLIGPGIDASHAYERTHRDSLYHTEKLVYAYLFSNILK |
| 2WYR Chain:A ((5-289)) | ----------IEKLKKFTQIPGISGYEERIREEIIREIKDF----ADYKVDAIGNLIVEL---GEGEERILFMAHMDEIGLLITGITDEGKLRFRKVGGIDDRLLYGRHVNVVTEKGIL-DGVIGATPPHL-----KSVIPWYDLVIDIGAESKEEALELVKPL-----DFAVFKKHFSVLNGKYVSTRGLDDRFGVVALIEAIKDLVDHELE--GKVIFAFTVQEEVGLKGAKFLANHYYPQYA---FAIDSFACCSPLTGDVKLGKGPVIRAVDNSAIYSRDLARKVWSIAEKNGIEIQIGVTG-GGTDASA------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WYR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71596 for 1968 contacts (-36.4/contact) +
2D Compatibility (PS) -28227 + (NN) -6435 + (LL) 4324
1D Compatibility (HY) -16800 + (ID) 3850
Total energy: -122584.0 ( -62.29 by residue)
QMean score : 0.325
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