Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKTMAEIQKEVDDFIGGFEEGYFSPLAMMARITEETGELAREINHYYGEKPKKTSEPTK---TVAEELGDCLFVLTCMANSLDIDMEKAHDTVMAKFKDRDKDRWTKKEEKAK
2OIE Chain:A ((33-102))
--------------------EQFHQPRNLLLALVGEVGELAELFQWKSDTEPGPQAWPPKERAALQEELSDVLIYLVALAARCHVDLPQA------------------------
General information:
TITO was launched using:
RESULT:
Template:
2OIE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5434 for 338 contacts (-16.1/contact) +
2D Compatibility (PS) -7217 + (NN) -5523 + (LL) 3360
1D Compatibility (HY) -4800 + (ID) 950
Total energy: -20564.0 ( -60.84 by residue)
QMean score : 0.233
(partial model without unconserved sides chains):
PDB file :
Tito_2OIE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OIE-query.scw
PDB file :
Tito_Scwrl_2OIE.pdb
: