Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYVSMKGMLERANKEHYAVMAINCFNLETARAVIDAAQELRAPIIIDLLQDHLTSHLGSRFLTKPIIKMAEEASVEVAINLDHGHDVAIVKQCLADGFSSVMMDASSFPYEENVAITKKMVEFAEVYHASVEAEVGNIGAVTGDNYTNQE--MYTDPKVAIDFAKRTGIDALAISYGSSHGDYPEGFTPAFQFDIVREIKSATNMPLVLHGGSGCGAENIRESVRLGINKINVGSDFMKAQVNQIKTNLKESPAVNYVDLIHETIKAGTKAVKYYIHLSGSTGKSL
1GVF Chain:A ((4-254))--ISTKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTF-KHIALEEIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLG-----------SAFLTDPQEAKRFVELTGVDSLAVAIGTAHGLYSK--TPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAWFAENPQGN------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1GVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -145691 for 1955 contacts (-74.5/contact) +
2D Compatibility (PS) -26700 + (NN) -11848 + (LL) 2676
1D Compatibility (HY) -18000 + (ID) 4000
Total energy: -203563.0 ( -104.12 by residue)
QMean score : 0.611

(partial model without unconserved sides chains):
PDB file : Tito_1GVF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GVF-query.scw
PDB file : Tito_Scwrl_1GVF.pdb: