Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLRQVTLKNTHQTSGIDKWISWLKKDISVRNRHKSKKLSLKKQRKVVQLFNNLFASGFSLTDMVTFLKRSKL--LSDYYTDRMNKALLEGKDLSKMLGEL-GFSDTVITQVALADLHGNISRSLLKIESYLANLLLVRKKVIEVATYPLILLTFLVLIMIGLRHYLMPQLGENNFATSLITNVPNIFLLLLAVVLIFSLIFYIVQKRLSRIKVACFLTTIPLVGSYVKLYLTAYYAREWGNLLSQGVELDQIVKVMQNQKSKLFREIGYDMEEGFLSGKAFHQKVLDYPFFLTELSLMIEYGQVKAKLGTELDIYADEKWEDFFTKLARATQLIQPVIFIFVALIIVMIYAAMLLPMYQNMEILS |
2WHN Chain:A ((59-162)) | -----------------------------------ERGPGLKDLAIFSRQLATMLGAGLTLLQALAILERQTENRKFREILKQVRTDVEGGMAFSEALSKHKIFSRLYVNLVRAGETSGGLDLILDRLASFLEKELELR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WHN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44247 for 755 contacts (-58.6/contact) +
2D Compatibility (PS) -11115 + (NN) -6092 + (LL) 25380
1D Compatibility (HY) -4400 + (ID) 900
Total energy: -41374.0 ( -54.80 by residue)
QMean score : 0.601
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