Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLIKGLLSPNSKVSPKDYKVYMRVLSFVFSVCSLIMIVSSFLHTFESNFTKGFSFGSGIALFAGSFYFLVITFSEKRFQHYYTKVFDERNQFIANMSCRLLFLLSVLVLVVLCLINVWFGITFSYAKFLLLILSFVLYGYLLIYFILQKLL |
2WW9 Chain:B ((36-67)) | ------LAKCKKPDLKEYTKIVKAVGIGFIAVGIIGYAIKLIHIPIRYVIV---------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WW9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8682 for 118 contacts (-73.6/contact) +
2D Compatibility (PS) -3105 + (NN) -64 + (LL) 9880
1D Compatibility (HY) -1600 + (ID) 300
Total energy: -3871.0 ( -32.81 by residue)
QMean score : 0.125
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