Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKEKLLVPALNCLLGLLFLGDHWFLFRLQNGELFAIVTLILLCTTSFLINKNHPKNLTLISMIITFLAVLSFLSTFLLA
2XPH Chain:A ((123-134))
-----------------HLGVHWCLAVVD--------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2XPH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3181 for 28 contacts (-113.6/contact) +
2D Compatibility (PS) -1292 + (NN) 572 + (LL) 6592
1D Compatibility (HY) -1200 + (ID) 250
Total energy: 1241.0 ( 44.32 by residue)
QMean score : -0.275
(partial model without unconserved sides chains):
PDB file :
Tito_2XPH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XPH-query.scw
PDB file :
Tito_Scwrl_2XPH.pdb
: