Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MELLKTPIFGICFSLILYTIGQHLFKKSKGFFLLQPLFFAMVSGIVILWLMSKGLGTDVKTFYTQAYKPGGDLIFWFLNPATIAFAVPLYKKNDVVKKYWVEILSSLVIGMIVSLMLIVAISKMVGLSQVGIASMLPQAATTAIALPITAAIGGNTAVTAMACILNAVIIYALGKKLVSFFHLNDSKIGAGLGLGTSGHTVGAAFALELGELQGAMAAIAVVVIGLVVDLVIPIFSHLIGLL |
2YUK Chain:A ((11-34)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RSTLKWEKEEALGEMATVAPVLYTNINFPNLKEEFPDWTTR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YUK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7061 for 119 contacts (-59.3/contact) +
2D Compatibility (PS) -2463 + (NN) 570 + (LL) 16616
1D Compatibility (HY) -1600 + (ID) 350
Total energy: 5712.0 ( 48.00 by residue)
QMean score : 0.234
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