Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MILRRRTIVLWQLGIAISLILSILALNLYFHSTPLQTNAALRNLAPSLNHLFGTDGLGRDMFVRTIKGLYFSLQVGLLGALMGVILATVFGVLAGLGNSIIDKIIAWLVDLFIGMPHLIFMILISFVVGKGAQGVIIATAVTHWPSLARLIRNEVYHLKNKEFVQLSKSMGKTPYYIVRHHILPLIASQIFIGFILLFPHVILHEASMTFLGFGLSAEQPSVGIILSEAAKHISLGNWWLVIFPGLYLILVVNAFDTIGESLKKLFYPQTDHF |
| 1R52 Chain:A ((210-274)) | ---------------------------------------------------------------------------GNKDSIGGVVTCVVRNLPTGLGEPCFDKLEAMLAHAMLSIP-----ASKGFEIGSGFQGVSVPGSKHNDPFYFTKTNNSGGVQGGISNGENIYFSVPFKSVRHDPAVTPRAIPIVEAMTALVLADALLIQKARDF--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R52.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30481 for 263 contacts (-115.9/contact) +
2D Compatibility (PS) -7017 + (NN) 799 + (LL) 13160
1D Compatibility (HY) -800 + (ID) 950
Total energy: -25289.0 ( -96.16 by residue)
QMean score : -0.085
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