Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVNYPHQLIRKTTVTKSKKKKIDFANRGMSFEAAINATNDYYLSHELAVIHKKPTPVQIVKVDYPKRSRAKIVEAYFRQASTTDYSGVYKGYYIDFEAKETRQKTAMPMKNFHAHQIEHMANVLQQKGICFVLLHFSTLKETYLLPANELISFYQI--DKGNKSMPIDYIRKNGFFVKESAFPQVPYLDIIEEKLLGGDYN
1ZP7 Chain:A ((34-199))
-----------------------------TLEDDLNETNKYYLTNQIAVIHKKPTPVQIVN-------------AYFKQSSTTDYNGIYKGRYIDFEAKETKNKTSFPLQNFHDHQIEHMKQVKAQDGICFVIISA--FDQVYFLEADKLFYFWDRKEKNGRKSIRKDELEETAYPISLGYAPRIDYISIIEQLYFS----
General information:
TITO was launched using:
RESULT:
Template:
1ZP7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106930 for 1113 contacts (-96.1/contact) +
2D Compatibility (PS) -16383 + (NN) -4506 + (LL) 2880
1D Compatibility (HY) -16800 + (ID) 3750
Total energy: -145489.0 ( -130.72 by residue)
QMean score : 0.421
(partial model without unconserved sides chains):
PDB file :
Tito_1ZP7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZP7-query.scw
PDB file :
Tito_Scwrl_1ZP7.pdb
: