Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIFKALLKMEFLLTKRQLANLIMAIGMPVAFFLFFSGFMGEGLTKAIEAIYVRNYMITMAGFSSLSFAFFTFPFSMKDDQLSNRMQLLRHSPVPMWQYYLAKIIRILFYYCLAITVVFLTGHILRQVSMPIEQWMQSFLLLLGGATCFIPFGLLVSYFKNTELMSMVANICYMSLAVLGGMWMPITMFPKWLQALSKLTPTYHLTQVILSPFANSFAGFSLIILIGYGIIMLVIAYLLSQKRHSI |
| 1AFO Chain:A ((93-98)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YGIRRL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 413 for 14 contacts (29.5/contact) +
2D Compatibility (PS) -538 + (NN) 810 + (LL) 22788
1D Compatibility (HY) 0 + (ID) 0
Total energy: 23473.0 ( 1676.64 by residue)
QMean score : 0.227
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