Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNKKNNYDLMYFIPLVFLIYPIGGILYYHYPFWTLFFTLAFVGAYLYSVIIRGESKYHMIAWSTMLTYIFYMTIFINSGFIWYIYFLSNLLVYRFRDKLKSFRFISFACTLATVVFLCFFKASDFGDRIMFLIVPIFCIGYMWIAIENRNSEEQREKIAEQNQYINILSAENERNRIGRDLHDSLGHTFAMMTLKTELALKLLEKRNYDKVQKELSELNHISHQSMSEVRQIVSNLKYRTVVEEIDELYRLFQLSNIKLTVVNKLETSQLSPVTQSTITMILKELSNNIVKHAEADSVELSLVRQGATINIEMIDNGC--GFTN--LDGDEFHSIQERLTIVEGTLTILSRSKPTHIQVVLKEV |
3EHJ Chain:A ((14-201)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------DANERIAELVKLEERQRMARDLVDTLGQKLSLMGLKSDLARKLIYK-DPEQAARELKSVQQTARTSLNEVRKIVSSMKGIRLKDELINIKQILEAADIMFIYEEEKWPENISLLNENILSMCLKEAVTNVVKHSQAKTCRVDIQQLWKEVVITVSDDGTFKGEENSF---HGLLGMRERLEFANGSLHIDTENGTKLTMAIPNN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EHJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57425 for 1174 contacts (-48.9/contact) +
2D Compatibility (PS) -19266 + (NN) -3459 + (LL) 15112
1D Compatibility (HY) -11600 + (ID) 2600
Total energy: -79238.0 ( -67.49 by residue)
QMean score : 0.428
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