Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLVAEDQSMLRDAMCQLLLMEESVSTIDQAGNGGEAIAILSNKAIDVAILDVEMPILSGLDVLEWVRK-YQNVKVIIVTTFKRSGYFQRAIRSNVDAYVLKDRSVADLMKTIQKVLSGGKEYSPELMENVISNPLSEQEIKILSLIAQGKTSKEIACTLFLSNGTVRNYTSNIFDKLGVNNRLEALKIAREKDWL
3B2N Chain:A ((6-122))
--LIIAEDQNMLRQAMVQLIKLHGDFEILADTDNGLDAMKLIEEYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFKRPGYFEKAVVNDVDAYVLKERSIEELVETINKVNN------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3B2N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103049 for 940 contacts (-109.6/contact) +
2D Compatibility (PS) -12728 + (NN) -6123 + (LL) 5460
1D Compatibility (HY) -14800 + (ID) 2850
Total energy: -134090.0 ( -142.65 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_3B2N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3B2N-query.scw
PDB file :
Tito_Scwrl_3B2N.pdb
: