Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKHHYFLAFFYGSVIIFAICFVIIDSLGVNLVHLYQTSRLWLIEQLIFSIFFLSLAVTILLLLTWFLLDDNSKRQINHNLRRILNNQSINVTDDGTEISTNIQRLSKKMNLMTASLQSKENSRILKSQEIVK-QERKRIARDLHDTVSQDLFAASMVLSGIAQNVSQLDVDQVGSQLLAVEEMLQHAQNDLRILLLHLRPVELENKTLSEGFKMILKELTDKSDIEVVYHESILTLPKKIE---DNIFRIG-QEFISNTLKHSQASRLEVYLNQTENELQLKMIDNGIGFDMDSVYDLSYGLKNIEDRVEDLAGNLQLLSQPDKGVAMDIRLPLVNQNEDKNG |
| 3EHH Chain:A ((16-214)) | -------------------------------------------------------------------------------------------------------------------------NERIA---ELVKLEERQRMARDLVDTLGQKLSLMGLK-SDLARKLIYKDPEQAARELKSVQQTARTSLNEVRKIVSSMKGIRLKDELIN------IKQILEAADIMFIYEEE--KWPENISLLNENILSMCLKEAVTNVVKHSQAKTCRVDIQQLWKEVVITVSDDGTFKG--------HGLLGMRERLEFANGSLHI--DTENGTKLTMAIPN--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EHH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33255 for 1249 contacts (-26.6/contact) +
2D Compatibility (PS) -19811 + (NN) -7799 + (LL) 13292
1D Compatibility (HY) -10800 + (ID) 2700
Total energy: -61073.0 ( -48.90 by residue)
QMean score : 0.472
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