Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEQIKLSKSDRQKVWWRSQFLQGSWNYERMQNMGWAYALIPALKKLYTTKEDRAAALERHMEFFNTHPYVAAPIIGVTLALEEEKASGTPVEDKAIQGVKIGMMGPLAGIGDPVFWFTVRPILGALGASLASAGNILGPIIFFVGWNLIRMSFLWYTQELGYKSGKEITKDMSGGILQDITKGASILGMFILAVLVKRWVAINFTVDLPKKTLSEGAYINFPKDHVSGQQLHDILGQVQSGLSLDKMQPQTLQGQLDSLIPGLAGLLLTFFCMWLLKKKVSPITIIIGLFIVGILARLAGVM |
| 2UXN Chain:A ((480-533)) | -----------------------------------------------------------------------------------------------AVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGEL------FLFWNLYKAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMYTL--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2UXN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15955 for 210 contacts (-76.0/contact) +
2D Compatibility (PS) -5294 + (NN) 2184 + (LL) 9056
1D Compatibility (HY) -6000 + (ID) 850
Total energy: -16859.0 ( -80.28 by residue)
QMean score : -0.342
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