Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKKIIAVDLDGTLLHNNNTISDYTADTLRKVQAQGHKVIITTGRPYRMALAHYLRLDLKTPMINFNGALTHIPEKKWAFERSATIDKKLLLETLNLSDAIQADFIASEYRKNFYITMDNRDKINPQLFGVNEITDKMALDVTKITRNPNALLMQTRHKDKYELAKELRQHFNHELEVDSWGGPLNILEFSPKGVNKAYALKHLLKSLNLSQENLIAFGDEHNDTEMLAFAHTGYAMKNANPTLLPYADQQIQWTNEEDGVAKTLEKLLL |
4DWO Chain:A ((189-269)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAAD-YITLTNDEDGVAEAIERIFN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DWO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10808 for 560 contacts (-19.3/contact) +
2D Compatibility (PS) -8616 + (NN) -4036 + (LL) 13576
1D Compatibility (HY) -8800 + (ID) 1750
Total energy: -20434.0 ( -36.49 by residue)
QMean score : 0.434
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