Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKLIWSHLFAIVSILGIWYYHVKIDHLMVILLASVLSLEMGFIAYYSRNIFIRLLASLGLLFFYPQSLGIFLSLVSLEWSTKDIWQSNHFMQYMAYLLAILFIISSALLSLKLLVNAYDISKRYQLATVIPVMLFSSFAFCLEKSGSLGLEGIILNPSAFFNGIQTNMANLDFKALSCLFLVQLLLWGILMED |
3HRL Chain:A ((69-99)) | ----------------------------------------------------------------------------------------------------------------------------------------NSLGF---TVLRFWNHEILQQTNDVLAEILRVLQELEK-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HRL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4805 for 130 contacts (-37.0/contact) +
2D Compatibility (PS) -2962 + (NN) 2284 + (LL) 16944
1D Compatibility (HY) -2800 + (ID) 200
Total energy: 8461.0 ( 65.08 by residue)
QMean score : -0.199
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