Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLNKIILSTAALTALFLGYNSVTADTYNNYQPHRSNNMDLTEEYNYNNQIELQERIKKLNIPFKEKLALLRKVKSRQDSYVLDTLRKEVENKNSEYSELEQEYQRISALIDAKFPQGKSSLAEKLHKELIWDLDGVKYDEGISKRTALKKLEGKINEYTKKYSYLF |
2DC4 Chain:A ((28-107)) | --------------------------------------------------IEEQEDVY-FELP-SPKLLRVRKINNTGKSYI--TYKEILDKRNEEFYELEFEVQD---------PEG----AIELFKRLGFKVQGV-----VKKRRWIYKLNNVTFELNRVEKAGD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DC4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11610 for 476 contacts (24.4/contact) +
2D Compatibility (PS) -7946 + (NN) 4518 + (LL) 4408
1D Compatibility (HY) -7600 + (ID) 1550
Total energy: 3440.0 ( 7.23 by residue)
QMean score : -0.059
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