Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTETIYKLILKDGLRQIKFKNSHLKLVSSAEEGKRGAIFAYRSKANMIKARGLVLTSMEAVSENQDSFTHWTPNVYRYGSYSDSKRQITRGHSEDNLRQVNTFYIDFDITSSAEEMTSGDILTAAIDLGFMPTLILKSDKGYQAYFVLSEPAYVTSHSQFRVVKVAKAISQNLRNYFSQTLPVDMTCNHFGIARMPRTDNIEFFHADYTYSFQEWLDWSMKQSDIPFPSKKPNLTVISGSEGVKQVDEPWYGLLMREANIKGDKALMGRNNVLFTLALANFSSGVSQSDCEVVLADFNEHLAEPLSQDEFLKVIYSAYSGKYEAANRDYIKLLCKAWVNENLRNSDLFIKQRWYKFKKNRANRKNSHLHEWKADVMAYLEGYFQSDDPFIQTTKKAIREELNIPERSLDKVLKALKAD-NKIFFAVKSGRGGGIRLTSVKAIVLSLIQVKKERQEAYFANVAAFFEESLGFIKRVIEGVKSGLKQAKQLSLFEADIG |
| 2Y5D Chain:A ((301-362)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AIRRAF-VPEAALEPVLEALKAKLAKI--TVGNPRNDAVRMGSL---------VSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y5D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2101 for 241 contacts (8.7/contact) +
2D Compatibility (PS) -6749 + (NN) -3933 + (LL) 28024
1D Compatibility (HY) -6800 + (ID) 1300
Total energy: 11343.0 ( 47.07 by residue)
QMean score : 0.334
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