Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFSWLEALYYTLIQLAKVNRLNALFLVSVVGYLCYQGIKLVRKTIRNFFQLMKGFIGDRENIKKCIKNKKEALVHSWKHRQDIDWKSTGKDKSKQLWNLMKRLATVAPSFLFLLLGNVLFRLIYQLPFVKQDRKRFDKEMKPLLYFKNYRSFVFMGIGFSFIAFILTNYFVTVLRAAIRFLYFSIMTLRDNSQVVSFNVDSLLIQNLFNARVFVIAPILAVPIFLIGLVVAWRSAWVNFEQYRDYNHNEEGDDRFATVKEIHQQYKKVPNKTETYPGEGGVPVLHETRKNLTGLTLKSQMLWQNRTFSRYLTNAERILGLLSTPSGDYYIDDSTTNLITMGITRSGKGEAHIAPIIDINSRAEIQPSLIIADPKGEHYQSSYKTMRRRGYDVNVLSFQNMDWSMSYNPLALAIAAAKKGYYEMTQTRVNAVAEAIYRKTKPGSGNGNAKYWEDTSISLFNAIAMALMDRANETVRNGETDAWDTVTVRNIAKFLTDLGSEEVFVNDFGEIVENPDKNQQVKKKSKITVYFDNLRKINQEQFSKFRDMADLNFRSSDFASEETKGNVFSSMMSGINLFLQDNIAKLTSKNSIDLESVGFPRRLSIKFRSSSNVAMRNEYTHKTAKVTITSQAVWGKTTKQVIHVDAATALIDGEGYLTYVIEPQLPDQFLVTIDFNHENNGGSAIRHKTFQFSAEKVYKKRGNVITLDDYTKKPVLDHIKVTVLNKQDDNLLQKEDIDLIYSDNPKVIYLVTPPNRTEYNSIVSLFLDQLFNANYELALSNGRKCVNRILHILDEFTNIPAIPHMDTKISIGLGQNILYYLWIQNLKQLVSEYGENTAETIRENC-SLKVYIKS-TAPATNEYFSKELGTRTITRRRRSSNILDEANPNVSIENPRQELLTPTQLSKLQEGEAVILRGVKGRDNAGRKITTDPIFLHEKTSLPYRYMFLQEEFDQSMALADIPVESGHRDLDLQDIAVGAQSTFNKIIDWRMALTDRMRTNGKIPQLASRKQTIKALSQSQFTSPADLTQAVIAEVFDEEDDDDLFFVDDVM |
1GL7 Chain:A ((280-402)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RLWLFIDELASLEKLASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVLGGSRTDPKTNEDMSLSLGEHEVERD----------------ERVRERVVMPAEIANLPDLTAYVGFAGNRPIAKVPLEIKQFANRQPAFVE-------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GL7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26426 for 658 contacts (-40.2/contact) +
2D Compatibility (PS) -11069 + (NN) -377 + (LL) 64276
1D Compatibility (HY) -7200 + (ID) 1450
Total energy: 17754.0 ( 26.98 by residue)
QMean score : 0.400
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