Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQKNNRLGYFGRQKQAFDDYVFLTKAKMKAERDYFASEGESDPERLAAQKARDQEFLKSLKKVGIGFIAFLLFYAIVRTVLGLW
2V3C Chain:A ((16-43))
--------------------------------------EGRKVPEELAIEKPSLKDIEKALKKLGLEPKIYRDKRYPRQHWEICG
General information:
TITO was launched using:
RESULT:
Template:
2V3C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5344 for 102 contacts (52.4/contact) +
2D Compatibility (PS) -2940 + (NN) -3298 + (LL) 2688
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -406.0 ( -3.98 by residue)
QMean score : 0.670
(partial model without unconserved sides chains):
PDB file :
Tito_2V3C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2V3C-query.scw
PDB file :
Tito_Scwrl_2V3C.pdb
: