Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKKTDTPDYKPSIYSLTRDELIAWAIEHGEKKFRASQIWDWLYKKRVQSFDEMTNISKDFIALLNENFVVNPLKQRIVQESADGTVKYLFELPDGMLIETVLMRQYYGLSVCVTTQVGCNIGCTFCASGLIKKQRDLNNG------EITAQIMLVQKYFDERGQGERVSHIVVMGIGEPFDNYTNVLKFLRTVNDDNGLAIGARHITVSTSGLAHKIREFANEGVQVN--LAVSLHAPNNELRSSIMRINRSFPLEKLFAAIEYYIETTNRRVTFEYIMLNGVNDTPENAQELADLTKKIRKLSYVNLIPYNPVSEHDQYSRSPKERVEAFYDVLKKNGVNCVVRQEHGTDIDAACGQLRSNTMKRDRQKAKVGR |
| 3CB8 Chain:A ((23-207)) | -----------------------------------------------------------------------------------------------------------------ITFFQGCLMRCLYCHN---RDTWDTHGGKEVTVEDLMKEVVTYRHFMNASGGG------VTASGGEAILQAEFVRDWFRACKKE------GIHTCLDTNGFVRRYDPVIDELLEVTDLVMLDLKQMNDEIHQNLVGVSNHRTLE--FAK---YLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYKLDGVKPPKKETMERVKGILEQYGHKVMF-------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3CB8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -76439 for 1315 contacts (-58.1/contact) +
2D Compatibility (PS) -18949 + (NN) -6750 + (LL) 11684
1D Compatibility (HY) -16000 + (ID) 1950
Total energy: -108404.0 ( -82.44 by residue)
QMean score : 0.419
|
|
|