Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSFQTNYIHLADEILSGKTSISYEQALEILNSDENWWEIYAAALYLKNQVSRNNIRLNVLLSAKQGLCAENCGYCSQSKESTADIDKFGLLPQNVILKQAIVAHQNGASVFCIAMSGTKPSKREIEQLCQVIPEIKKSLPLEICLTAGFLDREQLHQLKQAGIDR--INHNLNTPEENYPNIATTHSFKDRCDTLERIHNEDIDVCSGFICGM-GESDEGLITLAFRLKELNPYSIPVNFLLAVEGTPLGKYNYLTPIKCLKIMAMLRFVFPFKELRLSAGREVHFENFESLVTLLVDSTFLGNYLTEGGRNQHTDIEFLEKLQLNHTKKELI |
4JY8 Chain:A ((72-271)) | ------------------------------------------------------------------VCRKNCLYCGLRRDN-KNLKRYRMTPEEIV-ERARLAVQFGAKTI-VLQSGEDPYYMP-DVISDIVKEIKK-MGVAVTLSLGEWPREYYEKWKEAGADRYLLRHETANPVLHR-KLRPDTSFENRLNCLLTLKELGYETGAGSMVGLPGQTIDDLVDDLLFLKEHDFDMVGIGPFIPHPDTPLANEKKGDFTLTLKMVALTRILLPDSNIPATTAMGTIVPGGREITLRCGANVIMPNWTPSPYRQLYQLYPGKICVFEKDTACIPC |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JY8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104190 for 1470 contacts (-70.9/contact) +
2D Compatibility (PS) -21653 + (NN) -12578 + (LL) 5684
1D Compatibility (HY) -10400 + (ID) 2400
Total energy: -145537.0 ( -99.00 by residue)
QMean score : 0.411
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