Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLQENKTAIFDNVSKLALKAGRAPESVHIVAVTKYVNCQTTEALIRTGVNHIGENRVDKFLEKYQALKDE--KLTWHLIGSLQRRKVKDVINYVDYFHALDSVKLA---AEIQKRAQKPVKCFLQVNISREDSKHGFTIEQIDDALNLISRYDKIELIGIMTMAPLKATKEEISSIFEETESLRKRLQARNIERMPFTELSMGMSRDYDIAIQNGSTFVRIGTSFFK
3R79 Chain:A ((17-219))
-------------IADVAEKSGRKAADVALVAVSKTFDAEAIQPVIDAGQRVFGENRVQEAQGKWPALKEKTSDIELHLIGPLQSNKAADAVALFDVVESIDREKIARALSEECARQGRSLRFYVQVNTGLEPQKAGIDPRETVAFVAFCRDELKLPVEGLMCIPPA-----------EENPGPHFALLAKLAGQCGLEKLSMGMSGDFETAVEFGATSVRVGSAIFG
General information:
TITO was launched using:
RESULT:
Template:
3R79.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131154 for 1614 contacts (-81.3/contact) +
2D Compatibility (PS) -21474 + (NN) -7640 + (LL) 1904
1D Compatibility (HY) -12400 + (ID) 3100
Total energy: -173864.0 ( -107.72 by residue)
QMean score : 0.446
(partial model without unconserved sides chains):
PDB file :
Tito_3R79.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R79-query.scw
PDB file :
Tito_Scwrl_3R79.pdb
: