Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKIKIVTDSSITIEPELIKELDITVVPLSVMI-DGTLYSDNDLKAQGEFLNLMRGSKE---LPKTSQPPVGVFAEIYEKLMNEGAEHIIAIHLTHTLSGTIEASRQGANIAGADVTVIDSTFTDQCQKFQVVEAAKLAKEGADLDTILARVEEVRQKSELF---IGVSTLENLVKGGRIGRVTGLLSSLLNIKVIMELTNHELVPIVKGRGLKT-----FSKWLDNFVESAQTRKIAEIGISYCGKADMANNFKEKLAVLGAPISVLETGSIIQTHTGEDAFAVMVRYE |
| 1MGP Chain:A ((27-298)) | --KVKILVDSTADVPFSWMEKYDIDSIPLYVVWEDGR--SEPDEREPEEIMNFYKRIREAGSVPKTSQPSVEDFKKRYLKYKEEDYDVVLVLTLSSKLSGTYNSAVLASKEVDIPVYVVDTLLASGAIPLPARVAREMLENGATIEEVLKKLDE-RMKNKDFKAIFYVSNFDYLVKGGRV---------LLKIRVCLHIENGELIPYRKVRGDKKAIEALIEKLREDTPEGSKLRVIGVHADNEAGVVELLNTLRKSYEVVDEIIS--PMGKVITTHVGPGTVGFGIEVL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MGP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72266 for 2049 contacts (-35.3/contact) +
2D Compatibility (PS) -27512 + (NN) -8978 + (LL) 1304
1D Compatibility (HY) -18400 + (ID) 3900
Total energy: -129752.0 ( -63.32 by residue)
QMean score : 0.385
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