Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYREITAVE-HDRFVSESNQTNLLQSSNWPKVKDNWGSQLLGFFDGETQI-ASASILIKSLPLGFSMLYIPRGPIMDYSNLDIVTKVLKD-LKAFGKKQRALFIKCDPLIYLKMVNAKDFENSPDEKEGLIAIDHLQRAGADWTGRTTDLAHTIQPRFQANLYANQF-----GLDKMSKKTRQAIRTSKNKGVDIQFG-SHELLEDFAELMKKTEDRKGINLRGIDYYQKLLDTYPNNSYITMASLDVAKRLEKIEKECQIAQSERIKSLELNREKKVKQHQGTIDRLNKEIDFLKEAQKAYDRDIIPLAATLTLEFGNTSENIYAGMDDYFKSYSAPIYTWFETAQRAFERGNIWQNMGGIENDLS-GGLYHFKSKF-EPIIEEFIGEFNIPVNRLLYKASNYVYALRKKRNS |
| 4II9 Chain:A ((11-322)) | ------AVERYEEFMRQSPYGQVTQDLGWAKVKNNWEPVDVYLEDDQGAIIAAMSMLLGDTPTDKKFAYASKGPVMDVTDVDLLDRLVDEAVKAL--DGRAYVLRFDP-----EVAYSDEFNTTLQDHGYVT---RNRNVAD-----AGMHATIQPRLNMVLDLTKFPDAKTTLDLYPSKTKSKIKRPFRDGVEVHSGNSATELDEFFKTYTTMAERHGITHRPIEYFQRM-----------QAAFD--------------ADTMRIFVAE--REGKL------------------------------LSTGIALKYGRKIWYMYAGSMD-GNTYYAPYAVQSEMIQWALDTNTDLYDLGGIESESTDDSLYVFKHVFVKDAPREYIGEIDKVLDPEVYAELVKDGH------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4II9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49484 for 2383 contacts (-20.8/contact) +
2D Compatibility (PS) -31536 + (NN) -4291 + (LL) 6608
1D Compatibility (HY) -18000 + (ID) 4850
Total energy: -101553.0 ( -42.62 by residue)
QMean score : 0.410
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