Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQEKLKSKLDQAKGGAKEGFGKIT------GDKELEAKG-FI------EKTIAKGKELA-----DDAKDAVEGAVDAVKEKLK
1XT6 Chain:A ((43-112))
--------------GGLFEGFDLVLLGCSTWGDDSIELQDDFIPLFDSLEETGAQGRKVACFGCGDSSYEYFCGAVDAIEEKLK
General information:
TITO was launched using:
RESULT:
Template:
1XT6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6018 for 241 contacts (25.0/contact) +
2D Compatibility (PS) -5346 + (NN) -239 + (LL) 1172
1D Compatibility (HY) -3600 + (ID) 1250
Total energy: -3245.0 ( -13.46 by residue)
QMean score : 0.355
(partial model without unconserved sides chains):
PDB file :
Tito_1XT6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XT6-query.scw
PDB file :
Tito_Scwrl_1XT6.pdb
: