Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKGLLVMDVDSTLIMEEAIDLLAIEAGVGKQVAALTDAAMRGELDFEEALKKRVALLKGLPVTILTDILSSIHFTPGAYELIKECHKRQMKVGLVSGGFHETIDILAKQLQVDYVKANRLGVKGGFLTGEVEGEIVTKEVKKIKLKEWASENHLDLSQTIAMGDGANDLPMIKSAGVGIAFCAKPIVREEAAYQINEKNLLKVFDIIDANEN
1L7O Chain:A ((5-210))
--KKLILFNFDSTLVNNETIDEIAREAGVEEEVKKIT--------NFEQSLRKRVSLLKDLPIEKVEKAIKRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFCAKPILKEKADICIEKRDLREILKYIK----
General information:
TITO was launched using:
RESULT:
Template:
1L7O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127953 for 1696 contacts (-75.4/contact) +
2D Compatibility (PS) -21048 + (NN) -7848 + (LL) 1132
1D Compatibility (HY) -19200 + (ID) 4400
Total energy: -179317.0 ( -105.73 by residue)
QMean score : 0.546
(partial model without unconserved sides chains):
PDB file :
Tito_1L7O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L7O-query.scw
PDB file :
Tito_Scwrl_1L7O.pdb
: