Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEMSFRWYGE-DDPVTLENIGQIPTMKGIVTAIYDVPVGEVWSRERIQQLKEKVEAAGLKISVIESVPVHEDIKLGRPTRDLLIDNYIQTVKNLAAEGIDTICYNFMPVFDWTRTDLAYQYPDGSTALIFDETVSKKMDP---------VNGELSLPGWDASYSKEEMKAIMDAYAEIDEEKLWENLTYFIKRIIPEAEAVGVKMAIHPDDPPYSIFGLPRIITGLEAIERFVKLYDSKSNGITLCVGSYASDPQNDVLEISRRAFELDRVNFVHARNIKLGDGKSFKESAHPSEYGSIDMYEVIKLCHEFGFEGAIRPDHGRMIWGETGRPGYGLYDRALGATYLSGLYEAVIKGSK |
| 1TZ9 Chain:A ((5-350)) | ----FRWYGAAGDAIPLKHIRQIPGITGVVGTLLNKLPGDVWTVAEIQALKQSVEQEGLALLGIESVAIHDAIKAGTDQRDHYIDNYRQTLRNLGKCGISLVCYSFKPIFGWAKTDLAYENEDGSLSLLFDQAVVENMQPEDMYQLIHS---------WEEE-RLQQFQELKAMYAGVTEEDLVENLRYFLERVIPVCEEENIKMGIHPDDPPWEIFGLPRITKNLADLKRILSLVDSPANGITFCTGSLGADPTNDLPTMIREIGH--RINFVHFRNVKYLGEHRFEETAHPSVAGSLDMAELMQALVDVGYEGVIRPDHGRAIWDEKAMPGYGLYDRAMGLTYIQGLYEATKAK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TZ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63613 for 2610 contacts (-24.4/contact) +
2D Compatibility (PS) -33621 + (NN) -10601 + (LL) 1008
1D Compatibility (HY) -6400 + (ID) 4000
Total energy: -117227.0 ( -44.91 by residue)
QMean score : 0.361
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