Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIELGITTFGETTILEETNQSYSHPERIRQLVAEIELADQVGLDVYGIGEHHREDFAVSAPEIVLAA---GAVRTNNIRLSSAVTILSSNDPIRVYQQFSTIDALSNGRAEIMAGRGSFIESFPLFGYDLADYDDLFNEKMDMLLAINSATNLDWKGHLTQTVNERPIYPRA-------LQRQLPIWVATGGNVDSTIRIAEQGLPIVYATIGGNPKAFRQLVHIYKEVGSRNGHKPEQLKVAAHSWGWIEEDNQTAID---------------------------RYFFPTKQTVDNIAKGRPHWSEMTKEQYLRSVGPEGAIFVGSPEVVAHKIIGLVEALELDRFMLHLPVGSMPHKDVLNAIKLYGKEVAPIVRKYFEKN |
| 3FGC Chain:A ((16-353)) | ----------------------SQTEVMKRLVNLGKASEGCGFDTVWLLEHHFTEFGLLGNPYVAAAHLLGATETLNV--GTAAIVLPTAHPVRQAEDVNLLDQMSKGRFRFGICRGLYDKDFRVFGTDMDNSRALMDCWYDLM---KEGFN---EGYIAAD-NEHIKFPKIQLNPSAYTQGGAPVYV-VAESASTTEWAAERGLPMILSWIINTHEKKAQL-DLYNEVATEHGYDVTKIDHCLSYITSVDHDSNRAKDICRNFLGHWYDSYVNATKIFDDSDQTKGYDFNKGQWRDFVLK--------RRIDYSYEINP-----VGTPEECIAIIQQDIDATGIDNICCGFEANG-SEEEIIASMKLFQSDVMPYLKEKQ--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92041 for 2277 contacts (-40.4/contact) +
2D Compatibility (PS) -31237 + (NN) -6845 + (LL) 4544
1D Compatibility (HY) -15200 + (ID) 3750
Total energy: -144529.0 ( -63.47 by residue)
QMean score : 0.427
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