Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTNDFDFYLPEELIAQTPLEKRDASKLLVIDHKNKTMTDSHFDHILDELKPGDALVMNNTRVLPARLYGEKPDTHGHIELLLLKNTEGDQWEVLAKPAKRLRVGTKVSFGDGRLIATVTKELEHGGRIVEFSYDGIFLEVLESLGEMPLPPYIHEKLEDRDRYQTVYAKENGSAAAPTAGLHFTKELLEKIETKGVKLVYLTLHVGLGTFRPVSVDNLDEHEMHSEFYQLSKEAADTLNAVKESGGRIVAVGTTSIRTLETIGSKFNGELKADSGWTNIFIKPGYQFKVV---DAFSTNFHLPKSTLVMLVSA--FAGRDFVLEAYNHAVEERYRFFSFGDAMFVK |
| 4N9G Chain:A ((25-121)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGGSFSSYYWTWIRQSPGKGLEWIGEMNGNSGYTN--YNPSLQSRVTISKD---NQFSLKLTSLTAADTAVYYCARDAIVMVF---TDMRGRVDVWGPGILVT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N9G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8206 for 535 contacts (-15.3/contact) +
2D Compatibility (PS) -9225 + (NN) 1958 + (LL) 16796
1D Compatibility (HY) -3200 + (ID) 1350
Total energy: -3227.0 ( -6.03 by residue)
QMean score : 0.123
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