Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKSKKIENYQLLLLQAQALFSDETNALANLSNASAMLNAMLPNSVFTGFYLFDGKELILGPFQGGVSCVHITLGKGVCGESAQTAKTLIVDDVTKHANYISCDSKAMSEIVVPMFKNGKLLGVLDLDSSLVADYDEIDQEYLEKFVGILVEHTIWNLDMFGVEK
3KSG Chain:A ((14-155))
--------NYTLLKKQAASLIEDEHHMIAILSNMSALLNDNLDQINWVGFYLLEQNELILGPFQGHPASVHIPIGKGVCGTAVSERRTQVVADVHQFKGHIACDANSKSEIVVPIFKDDKIIGVLDIDAPITDRFDDNDKEHLEAIVKIIEKQLA----------
General information:
TITO was launched using:
RESULT:
Template:
3KSG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77767 for 1052 contacts (-73.9/contact) +
2D Compatibility (PS) -15617 + (NN) -6914 + (LL) 1580
1D Compatibility (HY) -13600 + (ID) 3400
Total energy: -115718.0 ( -110.00 by residue)
QMean score : 0.534
(partial model without unconserved sides chains):
PDB file :
Tito_3KSG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KSG-query.scw
PDB file :
Tito_Scwrl_3KSG.pdb
: