Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNHKTKKLTVLAIMIALDVFLTPIFRIEGMAFMSSVVNIIAGVIMGPIYALVMALVTAFIRILTQAGVASVAPLAILGAGPGAFLAGWLYQFYAKDWMSWVGEFIGTGIIGALLSAPIMVWFWTWTADGNHEVLAKASAAQSIFLFMPRFIGATIIGGVIALLLLQGLKRVPVFMTIQALFKGEKVK |
| 4UZK Chain:A ((125-148)) | -----------------------------------------------------------------------------------------------------------------------------------------------------RFMGALILRQVIAELIPVGLGRVPGGELMLVGSSAGGMG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4UZK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -8359 for 94 contacts (-88.9/contact) +
2D Compatibility (PS) -2398 + (NN) -322 + (LL) 13788
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -1191.0 ( -12.67 by residue)
QMean score : -0.016
|
|
|