Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATIKEIKAILETIVDLKDKRWQEYQTDSRAGVQKAILQRKKNIQSDLDEEARLEQMLVYEKKLYIEHINLIAGIDEVGRGPLAGPVVAAAVILPPNCKIKHLNDSKKIPKKKHQEIYQNILDQALAVGIGIQDSQCIDDINIYEATKHAMIDAVSHLSVAPEHLLIDAMVLDLSIPQTKIIKGDANSLSIAAASIVAKVTRDKIMSDYDSTYPGYAFSKNAGYGTKEHLEGLQKYGITPIHRKSFEPIKSML
2ETJ Chain:A ((17-204))
--------------------------------------------------------------ELYKKEFGIVAGVDEAGRGCLAGPVVAAAVVLEK--EIE----------AKRERLLDEIMEKA-AVGIGIASPEEIDLYNIFNATKLAMNRALENLSVKPSFVLVDGKGIELSVPGTCLVKGDQKSKLIGAASIVAKVFRDRLMSEFHRMYPQFSFHKHKGYATKEHLNEIRKNGVLPIHRLSFEPVLELL
General information:
TITO was launched using:
RESULT:
Template:
2ETJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105978 for 1495 contacts (-70.9/contact) +
2D Compatibility (PS) -18975 + (NN) -3418 + (LL) 6604
1D Compatibility (HY) -18800 + (ID) 4450
Total energy: -145017.0 ( -97.00 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_2ETJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ETJ-query.scw
PDB file :
Tito_Scwrl_2ETJ.pdb
: