Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLSVLDYGLIDYGKTASDAIQETILLSQEAERLGYHQFWVAEH---------HGVKAFSISNPELMIMHLANQTKSIKIGSGGIMP-LHYSSFKLAETLKTLETCHPNRV--SIGLGNSLGTVKVSNALRSLHKAHDYE-EVLEELKS-WLIDKSSSKE----PLVQPTLSSFPD----LYVLGSGQKSAYLAAKLGLGFTFGVFPFMDKDPLTEAKKLSSLYYHQFEEYYPNKSPNLMVAAFVVIADTSEEAENIAKTLDIWMLGNKDFNEFATFPTIEEANHYQLTPEQKAKIKSNRHRMIVGDPKQVKDSLDALVNASQAEELLLIPLVPGLDQRIKSLKLLSQLY |
| 1RHC Chain:A ((18-187)) | ------------------DALEQAI----RAEKVGFDSVWVDDHFHPWYHDNAQSAQAWAWMGAAL------QATKKVFISTCITCPIMRYNPAIVAQTFATLRQMYPGRVGVAVGAGEAMNEVPVTGEWPSVPVRQDMTVEAVKVMRMLWESDKPVTFKGDYFTLDKAFLYTKPDDEVPLYFSGMGPKGAKLAGMYGDHLMTVAAAPSTLKNVTIPKFEEGAREAGKDPSKMEHAMLIWYSVDPDYDKAVEALRFWAGCLVPSMFKYKVYDPKEVQLHANLVHCDTIKENYMCATDAEEMIKEIERFKEAGINHFCLGNSSPDVNFGIDIFKEVIPAVRD--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30072 for 1019 contacts (-29.5/contact) +
2D Compatibility (PS) -16255 + (NN) -6638 + (LL) 2848
1D Compatibility (HY) -10400 + (ID) 2300
Total energy: -62817.0 ( -61.65 by residue)
QMean score : 0.437
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