Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKIANTEVEINIFNLLKKLWKKKFLITFVAIAFATAGLFYSLFIVTPQYTSSTRIYVINPNTPNNSITAQDLQAGSFLANDYKEIITSTDVLEKVISSEKLNYPSSQLLQKITVSILKDTRVISISVEDANPKMSQKLANSVREAAVSKIKAVTQVEDITTLEKGNLPKAPSSPNIKKNVLIGFIVGAGLSTIVLVIMGILDDRVNTEEDIEKVLGLTSLGIVSDLNKL |
| 2VED Chain:A ((16-41)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DKRIKDEEDVEKELGLPVLGSIQKFNMT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VED.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2860 for 99 contacts (-28.9/contact) +
2D Compatibility (PS) -2866 + (NN) 254 + (LL) 15748
1D Compatibility (HY) -2000 + (ID) 650
Total energy: 7626.0 ( 77.03 by residue)
QMean score : 0.476
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