Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKKFAFAKGIATGVVATAATLAGAAFAIKKTIIEPEEEKIAFIEENRKKAARKRVSH
1S5L Chain:X ((16-42))
---LKGFFIGLLSGAVV-LGLTFAVLIAISQIDKVQRSLPFSDIITSVRYWVIHSITI
General information:
TITO was launched using:
RESULT:
Template:
1S5L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3507 for 211 contacts (16.6/contact) +
2D Compatibility (PS) -5401 + (NN) 3482 + (LL) 516
1D Compatibility (HY) 0 + (ID) 100
Total energy: 2004.0 ( 9.50 by residue)
QMean score : 0.038
(partial model without unconserved sides chains):
PDB file :
Tito_1S5L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S5L-query.scw
PDB file :
Tito_Scwrl_1S5L.pdb
: