Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLHKKSILECSELDEKIHQAEMNQLMDMLLSLPNYDCDIEVSFEDDYHKDKREPLFYESNLHRIFEFIEAQDIKNGVDTFLTDEHHLAFRAYGQGYFHKGKEGLITSLLTVKCFEEGMVPVDMSKYLLSPASDLEPSLTLEGGADA
2E8Z Chain:A ((587-646))
--------------------------------SINQLDWDRRETFKEDVHYIRR--LISLRKAHPAFRLRSAADIQRHLECLTLKEHLIAYRLYDLDEVDEWKDIIVIHHASPDSVEWRLPNDIPYRLLCDPSGFQEDPTEIKKTVAV
General information:
TITO was launched using:
RESULT:
Template:
2E8Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3942 for 252 contacts (-15.6/contact) +
2D Compatibility (PS) -6165 + (NN) -221 + (LL) 3348
1D Compatibility (HY) -3200 + (ID) 900
Total energy: -11080.0 ( -43.97 by residue)
QMean score : -0.121
(partial model without unconserved sides chains):
PDB file :
Tito_2E8Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E8Z-query.scw
PDB file :
Tito_Scwrl_2E8Z.pdb
: