Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYEKLLERFLTYVKINTRSNPNSTQTPTTQSQVDFALTVLKPEMEAIGLKDVH--------YLPSNGYLVGTLPATSDRLCHKIGFISHMDTADFNAENITPQIVDYKGGDIELGDSGYILSPKDFPNLNNYHGQTLITTDGKTLLGADDKSGIAEIMTAMEYLASHPEIEHCEIRVGFGPDEEIG-IGADKFDVKDFDVDFAYTVDGGP-LGELQYETFSAAGLELTFEGRNVHPGTAKNQMINALQLAMDFHSQLPENERPEQTDGYQGFYHLYDLSGTVDQAKSSYIIRDFEEVNFLKRKHLAQDIADNMN------EALQSE---RVKVKLYDQYYNMKKVIEKDMTPINIAKEVMEELDIKPIIEPIRGGTDGSKISFMGIPTPNLFAGGENMHG---RFEFVSLQTMEKAVDVILGIVAKD |
| 3RZA Chain:A ((21-393)) | INEQRLLNTFLELVQIDSETGNESTIQP-----------ILKEKFIALGL-DVKEDEAAKHPKLGANNLVCTMNSTIE---VPKLYLTSHMDTV-VPAINVKPIV----------KDDGYIYS------------------DGTTILGADDKAGLAAMLEVLQVIKEQ-QIPHGQIQFVITVGEESGLIGAKELNSELLDADFGYAIDASADVGTTVVGAPTQMLISAKIIGKTAHASTPK-EGVSAINIAAKAISRMKLGQVDEITTANIGKFH----GGSATNIVADEVILEAE-----ARSHDPERIKTQVKHMTDVFETTASELGGKAEVTVEQSYPGFK--INDNEAVVKIAQESARNLGLSANTIISGGGSDGSIINTFGIPSVILGVGYEKIHTTNERMPIKSLNLLASQVLEIIKIVARQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RZA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86097 for 3009 contacts (-28.6/contact) +
2D Compatibility (PS) -37403 + (NN) -15061 + (LL) 2784
1D Compatibility (HY) -18800 + (ID) 5350
Total energy: -159927.0 ( -53.15 by residue)
QMean score : 0.410
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