Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAEIDYKKVTGMIHSTESFGSVDGPGIRFIIFMQGCKMRCQYCHNPDTWEMETNNSKERTVEDVLKEALRYKHFW--------GKDGGITVSG-GEAMLQIDFITALFIEAKK-LG-----IHTTLDTCGFAYRATPEYHAILEKLLDVTDLVLLDLKEIDPEQHKIVTR----QSNKNILQFARYLSDR----GTPVWIRHVLVPGLTDIDDHLKRLGEFVQTLDNVDKFEVLPYHTMGEFKWRELGIPYPLAGVKPPTPERVKNAKDIMKTESYTEYLKRIQN |
3RFA Chain:A ((113-345)) | -----------------------DRATLCVSSQVGCALECKFCSTAQQGFN-----RNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPAL-----DKLGDMI--DVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP-C-KINLIPWNPFPGAP------------YGRSSNSRIDRFSKVLMSYGFTTIVRKTRG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97095 for 1619 contacts (-60.0/contact) +
2D Compatibility (PS) -22818 + (NN) -8047 + (LL) 2088
1D Compatibility (HY) -12000 + (ID) 1550
Total energy: -139422.0 ( -86.12 by residue)
QMean score : 0.470
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