Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMLSRQNSKLIQAFIAIILFFSLGLVIKYWPDTVIAFDQNIQESVRGQLPNLSTRFFKLITVIGNTVSQIAIAIMSVTFCYLKKWYPQARFIAVNAIISGICILSLKLIFQRVRPTLTHLVFAGGYSFPSGHSMGTFMIFGSIIILLQYYMPK-----------------SIWKLLCQGILGLLIFLIGLSRIYLGVHFPTDVLAGFILAYGILNLTAYIFLAKDWLKKVK
1UP8 Chain:A ((477-576))------------------------------------------------------------------------------------------------------------------------SPFHPSYGSGHAVVAGACVTILKAFFDSGIEIDQVFEVDKDEDKLVKSSFKGTLTVAGELNKLADNIAIGRNMAGVHYFSDQFESLLLGEQVAIGILEEQSLTYGENFFF


General information:
TITO was launched using:
RESULT:

Template: 1UP8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -67859 for 530 contacts (-128.0/contact) +
2D Compatibility (PS) -8253 + (NN) 423 + (LL) 11724
1D Compatibility (HY) 1200 + (ID) 750
Total energy: -63515.0 ( -119.84 by residue)
QMean score : 0.090

(partial model without unconserved sides chains):
PDB file : Tito_1UP8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1UP8-query.scw
PDB file : Tito_Scwrl_1UP8.pdb: