Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKKIILGILSLLSVVTLVACGSSDKQLQDKVEKKGKLVLAVSPDYAPFEFKALVNGKDKVVGADIELAQAIADELHVKLEVSPMSFDNVLSSLQTGKADMAISGLSYTKERAKVYDFSKPYYTTENAVLVRKSDLGKYTSIESLKGKKIAVQKGSIEEGVSKKSFKNSHVVSLTAMGEAISELKSGKVEAVDLEKPVAEGYLAQNPDLVLAKFALKTGEGDAKAVALPKDSGKMLKTVNKVIKRLEKEDKYKVYISDAAKLTGNQVE |
4PRS Chain:A ((3-221)) | -----------------------------DEIKSRGYLLVGLSADFPPFEF---VDENGNIVGFDVDLAKEIARRLGVELKIVDMTFDGLIPSLLTKKIDVIISGMTITEERKKVVAFSDPYFDAGQVIVVRKDSDFRPKTYEDLVGKTVAVQIGTTGD-IEVSKYDGIKVVRFDKFTDAFLELKRGRADAVVLDSATARAFVAKNPDLVISSGVLSS---EQYGIAVRKEDTDLLEFINSVLRELKKS-PYDVLIEKWFS------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PRS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67136 for 1696 contacts (-39.6/contact) +
2D Compatibility (PS) -23957 + (NN) -6879 + (LL) 2948
1D Compatibility (HY) -24400 + (ID) 3950
Total energy: -123374.0 ( -72.74 by residue)
QMean score : 0.591
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