Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVTIKDVAAKAGVNPSTVSRVLKDNASISSKTKERVKKAMEELGYVPNVAAQMLASGLTQNIGVIFPPLVLPDRLSEPFFMEILSTLTNEAKEHGFTVSIATSMSSEELLEQVKLMH--LQKRVDGFIVLYSDQKDPIREYLLKYKLPFVVVGAANGYENEITYIDNDNQLMGKSAIDYLYKKGHKSIQFVTDDLNSEVSEERYL-GYFKGARKLGLNQKPALL------FDRGNPQVLEEFINRVKEEETTALIVIGDTVSVRVMQFLSFYKLKVPDDISIMTFNNSLFSHLIHPYLSTFDINVNNLGRTSVRRLIDIIKSPDKVFSETIIVPFTLEERESVRDISKNNN |
2HSG Chain:A ((3-332)) | -VTIYDVAREASVSMATVSRVVNGNPNVKPSTRKKVLETIERLGYRPNAVARGLAS-KTTTVGVIIP--------SNIFYAELARGIEDIATMYKYNIILSNSDQNQD--KELHLLNNMLGKQVDGIIFMSGNVTEEHVEELKKSPVP-VVLAASIESTNQIPSVTIDYEQAAFDAVQSLIDSGHKNIAFVSGTLEEPINHAKKVKGYKRALTESGLPVRDSYIVEGDYTYDSG-IEAVEKLLE--EDEKPTAIFVGTDEMALGVIHGAQDRGLNVPNDLEIIGFDNTRLSTMVRPQLTSVVQPMYDIGAVAMRLLTKYMNK-ETVDSSIVQLPHRIEFRQSTK------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HSG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171279 for 2602 contacts (-65.8/contact) +
2D Compatibility (PS) -34435 + (NN) -15886 + (LL) 980
1D Compatibility (HY) -20400 + (ID) 4700
Total energy: -245720.0 ( -94.44 by residue)
QMean score : 0.442
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