Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLLYIFEKNIILRKILITFSLIIIFLLGRYVPIPG----VLISAYKGQDNNFATLYSTVTGGNLSQVGVFSLGIGPMMTTMILLRLFT--------IGKYSSGVSQKVQQFRQNVVMLVIAIIQGLAIAISFQ---------YHNGFSLTKLLLATMILVTGAYIISWIGN-LNAEYGFGGMTILVVVGMLVGQFNNIPLIFELFQDG--YQLAIILFLLWTLVAMYLMITFERSEYRIPV--MRTSIHNRL--VDDAYMPIKVNASGGMAFMYVYTLLMFPQYIIILLRSIFPTNPDITSYNDYFSLSSIQGVVIYMILMLVLSVAFTFVNIDPTKISEAMRESGDFIPNYRPGKETQSYLSKICYLFGTFSGFFMAFLGGVPLLFALGNDDLRTVSSMTGIFMMITGMSFM-ILDEFQVIRIRKQYTSVFENEEN |
| 5ABB Chain:A ((21-435)) | -------------RRLLFVIGALIVFRIGSFIPIPGIDAAVLAKLLEQQRGTIIEMFNMFSGGALSRASIFALGIMPYISASIIIQLLTVVHPTLAEIKKEGESGRRKISQYTRYGT-LVLAIFQSIGIATGLPNMPGMQGLVINPGFAF--YFTAVVSLVTGTMFLMWLGEQITERGIGNGISIIIFAGIVAGLPPAIAHTIEQARQGDLHFLVLLLVAVLVFAVTFFVVFVERGQRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIPAIFASSIILFPATIASWFGGGTGWN-WLTTISLYLQPGQPLYVLLYASAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLVGALYITFICLIPEFM---RDAMKVPFYFGGTSLLIVVVVIMDFMAQVQTLMMSSQYESALKKANL |
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General information:
TITO was launched using:
| RESULT:
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Template: 5ABB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -280811 for 2648 contacts (-106.0/contact) +
2D Compatibility (PS) -40736 + (NN) -14110 + (LL) 2056
1D Compatibility (HY) -36000 + (ID) 1550
Total energy: -371151.0 ( -140.16 by residue)
QMean score : 0.118
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