Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRINKYIAHAGIASRRKAEELIKQGMVTINGQVVNELATKVKAGDLVEIEGSPI-YNEEKVYYLLNKPRGVISSVSDDKGRKTVIDLLPQ-VKERIYPVGRLDWDTTGLLILTNDGDFTDKMIHPRNEIDKVYLARIKGIATKENLRPLTRGVVIDGKK--TKPARYNIIKVDHEKNRSVVELTIHEGRNHQVKKMFEQVGLLVDKLSRTQFGTLDL-TGLRPGEARRLNKKEISQLHNAAINKS |
| 1VIO Chain:A ((3-232)) | LRLDKFIAENVGLTRSQATKAIRQSAVKINGEIVKSGSVQISQEDEIYFEDELLTWIEEGQYFMLNKPQGCVCS-ND--DYPTIYQFFDYPLAGKLHSAGRLDVDTTGLVLLTDDGQWSHRITSPKHHCEKTYLVTLADPVEENYSAACAEGILLRGEKEPTKPAKLEILD-DYNVN-----LTISEGRYHQVKRMFAALGNKVVGLHRWKIGDVVLDESLEEGEYRPLTQSEIEKLV------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VIO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77120 for 1676 contacts (-46.0/contact) +
2D Compatibility (PS) -23152 + (NN) 620 + (LL) 1372
1D Compatibility (HY) -18400 + (ID) 3950
Total energy: -120630.0 ( -71.97 by residue)
QMean score : 0.524
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